To use a custom odbc set INCLUDE_DIR and LIB_DIR manually via : R CMD INSTALL - configure - vars = 'INCLUDE_DIR=. * rpm : unixODBC -devel ( Fedora, CentOS, RHEL) Warning messages: 1: In install.packages(updateinstlib l, 'Package', l, contriburl contriburl, : installation of package ‘agricolae’ had non-zero exit status 2: In install.packages(updateinstlib l, 'Package', l, contriburl contriburl, : installation of package ‘brms’ had non-zero exit status 3: In install.packages(update. Try installing : * deb : unixodbc -dev ( Debian, Ubuntu, etc) ANTICONF ERROR - Configuration failed because odbc was not found. ** package ‘ odbc’ successfully unpacked and MD5 sums checked PKG_CFLAGS = PKG_LIBS = - lodbc : 1 : 17 : fatal error : sql.h : No such file or directory compilation terminated. Warning messages: 1: In install.packages('tidyverse') : installation of package ‘xml2’ had non-zero exit status 2: In install.packages('tidyverse') : installation of package ‘rvest’ had non-zero exit status 3: In install. installation of package ‘caret’ had non-zero exit status The downloaded source packages are in ‘/var/R/tmp. = downloaded 281 KB * installing * source * package ‘ odbc’. Installation of package had non-zero exit status. Trying URL ' ' Content type 'application/x-gzip ' length 288033 bytes ( 281 KB) Following the instructions of Dean Attali (. Then the solution became very easy: run R as root user and then install 'devtools'. '-ERROR: configuration failed for package ‘ odbc ’ removing ‘ / usr / local / lib / R / site-library / odbc ’ Warning in install. ![]() Version.string Oracle Distribution of R version 3.1.1 (-)Īny help is appreciated as I am trying to solve this problem for days now.Installing package into ‘ / usr / local / lib / R / site - library’ code example for shell - Warning in install.packages : installation of package tidyverse had non-zero exit status - Best free resources for learning to. It means the package 'devtools' couldn't be installed into the default R library folder and possibly couldn't use some dependent packages. Checked nearly every page on stackoverflow regarding this problem Some packages like tseries or colorspace can be installed, but others can't. ![]() ![]() The weird thing is that I have downloaded the big data lite (4.4) image and can install packages without any errors. Or in the second case it gives this exact error message but for. Working backwards, we see ERROR: configuration failed for package rgeos. Both fail and give me a generic installation of package slackr had non-zero exit status. ![]() Installation of package ‘tidyr’ had non-zero exit status We see that the installation failed, (non-zero exit status warning at the bottom). installation of package ‘ggplot2’ had non-zero exit status The downloaded source packages are in ‘/private/var/folders/qt/hkzngxs4qxg19nmzrwyxqxc0000gn/T/Rtmpx元HUy/downloadedpackages’ jrkrideau July 19, 2021, 7:58pm 4 Ouch Would you start a new session with nothing loaded and do: install. Trying URL ' ' Content type 'application/x-gzip' length 345733 bytes (337 Kb) opened URL = downloaded 337 Kb ERROR: dependencies ‘tibble’, ‘dplyr’ are not available for package ‘tidyr’ * removing ‘/home/username/R/x86_64-unknown-linux-gnu-library/3.1/tidyr’ Warning in install.packages : > install.packages("tidyr") Installing package into ‘/home/username/R/x86_64-unknown-linux-gnu-library/3.1’ (as ‘lib’ is unspecified) Warning in install.packages :ĭependencies ‘tibble’, ‘dplyr’ are not available I can't install packages in R(studio) in the cloud. non-zero exit status simply means that the package has not been installed, it tells us nothing about the cause, we need to see a complete output message to.
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